BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B07LP1|AL425983
(794 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1349 1532 0.0
>3x_Contig1349
Length = 5890
Score = 1532 bits (772), Expect = 0.0
Identities = 787/793 (99%)
Strand = Plus / Minus
Query: 2 ccttatttattggttggcaatggagatgagtttgagatgagatgaaatgaaatgnatcag 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5607 ccttatttattggttggcaatggagatgagtttgagatgagatgaaatgaaatggatcag 5548
Query: 62 ttagaagattaacgtattgaatattatagagtagatttggttgttatccgttctacaact 121
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5547 ttagaagatttacgtattgaatattatagagtagatttggttgttatccgttctacaact 5488
Query: 122 ttgcagtgtgtagatgagatgtctttgatacgagacgttgaccgaaaaattggtcgtaaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5487 ttgcagtgtgtagatgagatgtctttgatacgagacgttgaccgaaaaattggtcgtaaa 5428
Query: 182 cgttgtagttttcttggtatgtttctccgatattgtttcttgcaatgtgtccgttcttct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5427 cgttgtagttttcttggtatgtttctccgatattgtttcttgcaatgtgtccgttcttct 5368
Query: 242 tgttcaataaatatgtatcgttacctctctgttgcaattcgatcaagcctgcttcctcga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5367 tgttcaataaatatgtatcgttacctctctgttgcaattcgatcaagcctgcttcctcga 5308
Query: 302 atgcggcaagtaagtcatattgtaaatctttgacgtcttctatcccacaacagagtctga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5307 atgcggcaagtaagtcatattgtaaatctttgacgtcttctatcccacaacagagtctga 5248
Query: 362 tcaagtcttcagggaacgctctttgtttccgtagttctggatcgatggaggcatgtgaca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5247 tcaagtcttcagggaacgctctttgtttccgtagttctggatcgatggaggcatgtgaca 5188
Query: 422 tcttgcatggcatggagatcaacgagttgacacatccaaacgataccgtgacggcccata 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5187 tcttgcatggcatggagatcaacgagttgacacatccaaacgataccgtgacggcccata 5128
Query: 482 tatttagtcttttagaagttacaatggcttcgcttagtgctaggtcgccagtctcaatgg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5127 tatttagtcttttagaagttacaatggcttcgcttagtgctaggtcgccagtctcaatgg 5068
Query: 542 atagcactgcaccgggaccattgttgaaacttttatgcmattcgaactgagggtgagatt 601
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5067 atagcactgcaccgggaccattgttgaaacttttatgcaattcgaactgagggtgagatt 5008
Query: 602 ccaacccaacaaaccttgtctttagttgctggttattatctgtaggcttgaatccgcata 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5007 ccaacccaacaaaccttgtctttagttgctggttattatctgtaggcttgaatccgcata 4948
Query: 662 tatcttgtagccagtgcgagagcccatttgcgtttatctgttgtttgtaaagacgaacag 721
||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 4947 tatcttgtagccagtgcgagagcaccattgcgtttatctgttgtttgtaaagacgaacag 4888
Query: 722 ataaggtcttgagaccacggatcaagagccatgaatccatcggagatagaccggcaccgg 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4887 ataaggtcttgagaccacggatcaagagccatgaatccatcggagatagaccggcaccgg 4828
Query: 782 tactgttaatgac 794
|||||||||||||
Sbjct: 4827 tactgttaatgac 4815
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5580
Number of Sequences: 1807
Number of extensions: 5580
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 794
length of database: 10,358,551
effective HSP length: 16
effective length of query: 778
effective length of database: 10,329,639
effective search space: 8036459142
effective search space used: 8036459142
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)